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RawPop-class

Raw Population

Description

The raw population class contains only genotype data.

Usage

## S4 method for signature 'RawPop'
x[i]

## S4 method for signature 'RawPop'
c(x, ...)

## S4 method for signature 'RawPop'
show(object)

Arguments

x

a 'RawPop' object
i

index of individuals
...

additional 'RawPop' objects
object

a 'RawPop' object

Methods (by generic)

  • [: Extract RawPop by index

  • c: Combine multiple RawPops

  • show: Show population summary

Slots

nInd

number of individuals

nChr

number of chromosomes

ploidy

level of ploidy

nLoci

number of loci per chromosome

geno

"matrix" containing chromosome genotypes. The "matrix" has dimensions nChr by 1 and each element is a three dimensional array of raw values. The array dimensions are nLoci by ploidy by nInd.

AlphaSimR

Breeding Program Simulations

v0.13.0
MIT + file LICENSE
Authors
Chris Gaynor [aut, cre] (<https://orcid.org/0000-0003-0558-6656>), Gregor Gorjanc [aut] (<https://orcid.org/0000-0001-8008-2787>), John Hickey [aut] (<https://orcid.org/0000-0001-5675-3974>), Daniel Money [ctb] (<https://orcid.org/0000-0001-5151-3648>), David Wilson [ctb]
Initial release
2020-10-20

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