BGPhazard: BMTKLeinbook – R documentation

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BMTKLeinbook

Times to death or relapse (in days) for patients with bone marrow transplants for Hodgkin and non-Hodgkin lymphoma

Description

Was collected on 43 bone marrow transplant patients at The Ohio State University Bone Marrow Transplant Unit. Details of this study can be found in Avalos et al. (1993).

Usage

data(BMTKleinbook)

Format

A data frame with 43 observations containing:

times: time to death or relapse in days
delta: Status indicator: 1 = death or relapse; 0 = otherwise
tTransplant: Allogeneic transplant from an HLA match sibling donor (1) or an autogeneic transplant (0)
hodgkin: Hodgkin disease (1), or non-Hodgkin lymphoma (0)
karnofsky: The pretransplant Karnofsky score
waiting: Waiting time to transplant

Source

Klein, J. P., and Moeschberger, M. L. (2003). Survival analysis: techniques for censored and truncated data. Springer Science & Business Media.

References

Copelan, E. A., Biggs, J. C., Thompson, J. M., Crilley, P., Szer, J., Klein, J. P., Kapoor, N., Avalos, B. R., Cunningham, I., Atkinson, K., Downs, K., Harmon, G. S., Daly, M. B., Brodsky, I., Bulova, S. I., and Tutschka, P. J. Treatment for Acute Myelocytic Leukemia with Allogeneic Bone Marrow Transplantation Following Preparation with Bu/Cy. Blood 78 (1991): 838-843.

Examples

## Cox Cure Gama Process Example 1
# data(BMTKleinbook)
    # res <- CCuMRes(BMTKleinbook, covs.x = c("tTransplant","hodgkin","karnofsky","waiting"),
    #                covs.y = c("tTransplant","hodgkin","karnofsky","waiting"),
    #                        type.t = 2, K = 72, length = 30,
    #                        alpha = rep(2,72), beta = rep(2,72), c.r = rep(50, 71), type.c = 2,
    #                        var.delta.str = .1, var.theta.str = 1,
    #                        var.delta.ini = 100, var.theta.ini = 100,
    #                        iterations = 100, burn.in = 10, thinning = 1)

BGPhazard

Markov Beta and Gamma Processes for Modeling Hazard Rates

v2.1.0

GPL (>= 2)

Authors

L. E. Nieto-Barajas, J. A. Garcia Bueno, E.A. Morones Ishikawa and J. Pliego

Initial release