## S3 method for class 'boin'
summary(object, ...)

###### single-agent trial ######

## summarize the object returned by get.boundary()
bound <- get.boundary(target=0.3, ncohort=10, cohortsize=3)
summary(bound)


## summarize the object returned by get.oc()
oc.single <- get.oc(target=0.3, p.true=c(0.05, 0.15, 0.3, 0.45, 0.6), ncohort=10,
cohortsize=3, ntrial=1000)
summary(oc.single)


## summarize the object returned by select.mtd()
n <- c(3, 3, 15, 9, 0)
y <- c(0, 0, 4, 4, 0)
selmtd <- select.mtd(target=0.3, npts=n, ntox=y)
summary(selmtd)


###### drug-combination trial######

###### drug-combiation trial to find a single MTD ######

## summarize the object returned by next.comb()
n <- matrix(c(3, 0, 0, 0, 0, 0, 0, 0,  0, 0, 0, 0), ncol=4, byrow=TRUE)
y <- matrix(c(0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0), ncol=4, byrow=TRUE)
nxt.comb <- next.comb(target=0.25, npts=n, ntox=y, dose.curr=c(1, 1))
summary(nxt.comb)


## summarize the object returned by next.comb()
n <- matrix(c(3, 3, 0, 0, 0, 0, 0, 0,  0, 0, 0, 0), ncol=4, byrow=TRUE)
y <- matrix(c(0, 1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0), ncol=4, byrow=TRUE)
nxt.comb <- next.comb(target=0.25, npts=n, ntox=y, dose.curr=c(1, 2))
summary(nxt.comb)


## summarize the object returned by get.oc.comb() when mtd.contour=FALSE
p.true <- matrix(c(0.02,0.04,0.08,0.14,
               0.08,0.25,0.42,0.48,
               0.25,0.45,0.50,0.60), byrow=TRUE, ncol=4)

oc.comb <- get.oc.comb(target=0.25, p.true=p.true, ncohort=16, cohortsize=3,
           ntrial=100)
summary(oc.comb)


## summarize the object returned by select.mtd.comb()
n <- matrix(c(6, 3, 0, 0, 6, 24, 9, 0, 0, 0, 0, 0), ncol=4, byrow=TRUE)
y <- matrix(c(0, 0, 0, 0, 1, 5, 4, 0, 0, 0, 0, 0), ncol=4, byrow=TRUE)
sel.comb <- select.mtd.comb(target=0.25, npts=n, ntox=y)
summary(sel.comb)



###### drug-combiation trial to find the MTD contour ######

## summarize the object returned by next.subtrial()
n <- matrix(c(6, 0,  0, 0,
           6, 0, 0, 0,
           9, 12, 0, 0), ncol=4, byrow=TRUE)
y <- matrix(c(0, 0, 0, 0,
           1, 0, 0, 0,
           2, 3, 0, 0), ncol=4, byrow=TRUE)
nxt.trial <- next.subtrial(target=0.3, npts=n, ntox=y)
summary(nxt.trial)


## summarize the object returned by get.oc.comb() when mtd.contour=TRUE.
p.true <- matrix(c(0.01,0.03,0.10,0.20,0.30,
               0.03,0.05,0.15,0.30,0.60,
               0.08,0.10,0.30,0.60,0.75), byrow=TRUE, ncol=5)

oc.comb <- get.oc.comb(target=0.3, p.true, ncohort=c(10,5,5), cohortsize=3,
   n.earlystop=12, startdose=c(1,1),ntrial=100, mtd.contour=TRUE)
summary(oc.comb)


## summarize the object returned by select.mtd.comb()
n <- matrix(c(6, 9, 24, 0,
           6,  24, 9, 0,
           12, 18, 0, 0), ncol=4, byrow=TRUE)
y <- matrix(c(0, 1, 5, 0,
           1, 5, 4, 0,
           1, 5, 0, 0), ncol=4, byrow=TRUE)
sel.comb2 <- select.mtd.comb(target=0.3, npts=n, ntox=y, mtd.contour=TRUE)
summary(sel.comb2)