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findFeeding2

Function for investigation of feeding between phenotypes


Description

The generic function findFeeding2

Usage

findFeeding2(object, time, mets, rm_own = T, ind_threshold = 0, collapse = F)

## S4 method for signature 'Eval'
findFeeding2(object, time, mets, rm_own = T, ind_threshold = 0, collapse = F)

Arguments

object

An object of class Eval.

time

A numeric vector giving the simulation steps which should be plotted.

mets

Character vector of substance names which should be considered

rm_own

A boolean flag indicating if interactions within same species should be plotted

ind_threshold

A number indicating the threshold of individuals to be considered as producers/consumers

collapse

A boolean flag indicating if all phenotypes for every species should be collapsed to either producers or consumers

Value

Graph (igraph)


BacArena

Modeling Framework for Cellular Communities in their Environments

v1.8.2
GPL-3 | file LICENSE
Authors
Eugen Bauer [aut], Johannes Zimmermann [aut, cre]
Initial release

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