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findFeeding3

Function for investigation of feeding between phenotypes


Description

The generic function findFeeding3

Usage

findFeeding3(object, time, mets, plot = TRUE, cutoff = 1e-06)

## S4 method for signature 'Eval'
findFeeding3(object, time, mets, plot = TRUE, cutoff = 1e-06)

Arguments

object

An object of class Eval.

time

A numeric vector giving the simulation steps which should be plotted.

mets

Character vector of substance names which should be considered

plot

Should the graph also be plotted?

cutoff

Accuracy of crossfeeding interaction (minimal flux to be considered)

Value

Graph (igraph)


BacArena

Modeling Framework for Cellular Communities in their Environments

v1.8.2
GPL-3 | file LICENSE
Authors
Eugen Bauer [aut], Johannes Zimmermann [aut, cre]
Initial release

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