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getVarSubs

Function to get varying substances


Description

The generic function getVarSubs returns ordered list of substances that showed variance during simulation

Usage

getVarSubs(
  object,
  show_products = TRUE,
  show_substrates = TRUE,
  cutoff = 1e-06,
  size = NULL
)

## S4 method for signature 'Eval'
getVarSubs(
  object,
  show_products = FALSE,
  show_substrates = FALSE,
  cutoff = 1e-06,
  size = NULL
)

Arguments

object

An object of class Eval.

show_products

A boolean indicating if only products should be shown

show_substrates

A boolean indicating if only substrates should be shown

cutoff

Value used to define numeric accuracy while interpreting optimization results

size

Maximal number of returned substances (default: show all)


BacArena

Modeling Framework for Cellular Communities in their Environments

v1.8.2
GPL-3 | file LICENSE
Authors
Eugen Bauer [aut], Johannes Zimmermann [aut, cre]
Initial release

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