BacArena: plotGrowthCurve – R documentation

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plotGrowthCurve

Plot growth curve for several simulations

The function plotGrowthCurve takes a list of simulations and plots the time course of species with standard deviation.

plotGrowthCurve(
  simlist,
  time = c(NULL, NULL),
  ret_data = FALSE,
  use_biomass = F,
  specs = NULL
)

`simlist`	A list of simulations (eval objects).
`time`	Vector with two entries defining start and end time
`ret_data`	Set true if data should be returned
`use_biomass`	If enabled then biomass is used instead of cell number
`specs`	List of species for which a growth curve should be shown (default: all)

Modeling Framework for Cellular Communities in their Environments

v1.8.2

GPL-3 | file LICENSE

Authors

Eugen Bauer [aut], Johannes Zimmermann [aut, cre]

Initial release