Plot growth curve for several simulations
The function plotPhenCurve takes a list of simulations and plots the time course of species with standard deviation.
plotPhenCurve( simlist, subs, phens = NULL, time = c(NULL, NULL), cluster = TRUE, inAll = TRUE, col = colpal3, with_gc = FALSE, return_dat = FALSE )
simlist |
A list of simulations (eval objects). |
subs |
A vector of substance names that are used for phenotype clustering. |
phens |
If phencurve is given then phens specifies the phenotypes which sould be plotted again. |
time |
Vector with two entries defining start and end time |
cluster |
True if phenotypes should be clustered/condensed. |
inAll |
True if only phenotypes which occur in all replicates should be considered |
col |
Vector with color that should be used |
with_gc |
True if growth curve of organisms should be included |
return_dat |
Should data be returned? (default false) |
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