Function for plotting the overall change in reaction activity
The generic function plotTotFlux plots the time course of reactions with high variation in activity for an Eval object.
plotTotFlux(object, legendpos = "topright", num = 20) ## S4 method for signature 'Eval' plotTotFlux(object, legendpos = "topright", num = 20)
object |
An object of class Eval. |
legendpos |
A character variable declaring the position of the legend |
num |
An integer defining the number of substrates to be plot |
data(Ec_core, envir = environment()) #get Escherichia coli core metabolic model
bac <- Bac(Ec_core,deathrate=0.05,
minweight=0.05,growtype="exponential") #initialize a bacterium
arena <- Arena(n=20,m=20) #initialize the environment
arena <- addOrg(arena,bac,amount=10) #add 10 organisms
arena <- addSubs(arena,40) #add all possible substances
eval <- simEnv(arena,5)
plotTotFlux(eval)Please choose more modern alternatives, such as Google Chrome or Mozilla Firefox.