Cut and simulation of a boolean model at t1
This function cuts a model according to a bitstring optimised at T1, and simulates the model accordingly.
simulateTN(CNOlist, model, bStrings)
CNOlist |
a CNOlist object |
model |
a full model |
bStrings |
a bitstring to cut the model, as output by |
This function is a wrapper around the family of functions called simulatorT1 , T2 and TN.
a matrix of simulated values, including all species in the model, i.e. to be used as input of gaBinaryTN.
T.Cokelaer, S.Schrier based on simulatorT1 (C.Terfve)
# This will compute the output of a random model obtained by randomly selecting # which gates of the initial models are included. data(CNOlistToy,package="CellNOptR") data(ToyModel,package="CellNOptR") simRes<-simulateTN( CNOlist=CNOlistToy, model=ToyModel, bStrings=list(round(runif(length(ToyModel$reacID)))))
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