DOSE: doSim – R documentation

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doSim

measuring similarities between two DO term vectors.

doSim(DOID1, DOID2, measure = "Wang")

`DOID1`	DO term vector
`DOID2`	DO term vector
`measure`	one of "Wang", "Resnik", "Rel", "Jiang", and "Lin".

provide two DO term vectors, this function will calculate their similarities.

score matrix

Disease Ontology Semantic and Enrichment analysis

v3.16.0

Artistic-2.0

Authors

Guangchuang Yu [aut, cre], Li-Gen Wang [ctb], Vladislav Petyuk [ctb], Giovanni Dall'Olio [ctb], Erqiang Hu [ctb]

Initial release