EMbC: sct3 – R documentation

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sct3

Dynamic 3D-scatterplot

Description

sct3 generates a dynamic 3D-scatterplot of a multivariate binClst_instance, showing clusters in different colors. The scatter plot can be zoomed/rotated with the mouse.

Usage

sct3(obj, ...)

## S4 method for signature 'binClst'
sct3(obj, showVars = NULL, showClst = NULL, ...)

Arguments

`obj`	A binClst_instance.
`...`	Parameters `ref`, `showVars` and `showClst` are optional.
`showVars`	When the number of variables is greater than two, a length 3 numeric vector indicating one splitting variable and two variables to be scattered (given in that order).
`showClst`	When the number of variables is greater than two, a numeric vector (of variable length) indicating a subset of the clusters that will be shown in the scatter plot. This is useful in case of overlapping clusters.

Details

This function needs the package "rgl" to be installed.

Examples

## Not run: 
# -- apply EMbC to the example path with scv='height' --
mybcp <- stbc(expth,scv='height')
# -- show a dynamic 3D-scatterplot --
sct3(mybcp)
# -- show only a subset of clusters --
sct3(mybcp,showClst=c(2,4,6))

## End(Not run)

EMbC

Expectation-Maximization Binary Clustering

v2.0.3

GPL-3 | file LICENSE

Authors

Joan Garriga, John R.B. Palmer, Aitana Oltra, Frederic Bartumeus

Initial release

2019-12-16