Create a histogram from a frequency table.
Creates a histogram from values in a frequency table. Primarily used with already summarized length frequency data.
histFromSum(x, ...) ## Default S3 method: histFromSum(x, y, ...) ## S3 method for class 'table' histFromSum(x, ...) ## S3 method for class 'formula' histFromSum(x, data = NULL, ...)
x |
A numeric vector of bin/category values, a formula of the form |
... |
Additional arguments for |
y |
A numeric vector of count/frequency values. |
data |
A data.frame that contains the |
None, but a graphic is created.
Derek H. Ogle, derek@derekogle.com
See hist
and hist.formula
for related functionality.
## Make some dummy data with a length category variable set.seed(634434789) df <- data.frame(tl=round(rnorm(100,100,20))) df$lcat10 <- lencat(df$tl,w=10) ## Summarize as tables ( tbl1 <- xtabs(~lcat10,data=df) ) ( tbl2 <- table(df$lcat10) ) ## Turn the tables into a data.frame for testing (convert ## the categories variables to numeric with fact2num()) df2 <- data.frame(tbl1) df2$lcat10 <- fact2num(df2$lcat10) ## Turn the table into a matrix for testing ( mat1 <- cbind(lcat10=as.numeric(rownames(tbl1)),freq=tbl1) ) ## Histogram of the raw data ... set breaks and x-axis label brks <- seq(20,160,10) xlbl <- "Total Length (mm)" hist(~tl,data=df,breaks=brks,xlab=xlbl) ## Use this function with various inputs ... changed colors ## on each plot so that it was obvious that a new plot was made. # table from xtabs() histFromSum(tbl1,breaks=brks,xlab=xlbl,col="gray75") # table from table() histFromSum(tbl2,breaks=brks,xlab=xlbl,col="gray70") # vectors from data.frame histFromSum(df2$lcat10,df2$Freq,breaks=brks,xlab=xlbl,col="gray65") # vectors from matrix histFromSum(mat1[,"lcat10"],mat1[,"freq"],breaks=brks,xlab=xlbl,col="gray60") # formula from a data.frame histFromSum(Freq~lcat10,data=df2,breaks=brks,xlab=xlbl,col="gray55")
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