Draw the General Procrustes Analysis (GPA) map
Draw the General Procrustes Analysis (GPA) map.
## S3 method for class 'GPA' plot(x, axes = c(1, 2), lab.ind.moy = TRUE, habillage = "ind", partial = "all", chrono = FALSE, xlim = NULL, ylim = NULL, cex = 1, title = NULL, palette = NULL, ...)
x |
an object of class GPA |
axes |
a length 2 vector specifying the components to plot |
lab.ind.moy |
boolean, if TRUE, the label of the mean points are drawn |
habillage |
string corresponding to the color which are used. If "ind", one color is used for each individual; if "group" the individuals are colored according to the group |
partial |
list of the individuals or of the center of gravity for which the partial points should be drawn (by default, partial = "none" and no partial points are drawn) |
chrono |
boolean, if TRUE, the partial points of a same point are linked (useful when groups correspond to different moment) |
xlim |
range for the plotted 'x' values, defaulting to the range of the finite values of 'x' |
ylim |
range for the plotted 'y' values, defaulting to the range of the finite values of 'y' |
cex |
cf. function |
title |
string corresponding to the title of the graph you draw (by default NULL and a title is chosen) |
palette |
the color palette used to draw the points. By default colors are chosen. If you want to define the colors : palette=palette(c("black","red","blue")); or you can use: palette=palette(rainbow(30)), or in black and white for example: palette=palette(gray(seq(0,.9,len=25))) |
... |
further arguments passed to or from other methods |
Returns the General Procrustes Analysis map.
Elisabeth Morand, Francois Husson Francois.Husson@agrocampus-ouest.fr
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