Get mutation loads information from Mutect VCF files.
Get mutation loads information from Mutect VCF files.
GetMutationLoadsFromMutectVCFs(catalogs)
catalogs |
A list generated by calling function
|
A list containing mutation loads information from Mutect VCF files:
total.variants Total number of mutations.
SBS Number of single base substitutions.
DBS Number of double base substitutions.
ID Number of small insertions and deletions.
discarded.variants Number of other types of mutations which are
excluded in the analysis in ICAMS.
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