ICAMS: GetSequenceKmerCounts – R documentation

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GetSequenceKmerCounts

Generate k-mer abundance from given nucleotide sequences

Generate k-mer abundance from given nucleotide sequences

GetSequenceKmerCounts(sequences, k)

`sequences`	A vector of nucleotide sequences
`k`	Length of k-mers (k>=2)

Matrix of the counts of each k-mer inside sequences

In-Depth Characterization and Analysis of Mutational Signatures ('ICAMS')

v2.3.10

GPL-3 | file LICENSE

Authors

Steve Rozen, Nanhai Jiang, Arnoud Boot, Mo Liu, Yang Wu

Initial release