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plot.juxtapose

Plot MCMC Juxtaposition


Description

This may be used to plot a juxtaposition of MCMC algorithms according either to IAT or ISM (Independent Samples per Minute).

Usage

## S3 method for class 'juxtapose'
plot(x, Style="ISM", ...)

Arguments

x

This required argument is an object of class juxtapose.

Style

This argument accepts either IAT or ISM, and defaults to ISM.

...

Additional arguments are unused.

Details

When Style="IAT", the medians and 95% probability intervals of the integrated autocorrelation times (IATs) of MCMC algorithms are displayed in a caterpillar plot. The best, or least inefficient, MCMC algorithm is the algorithm with the lowest IAT.

When Style="ISM", the medians and 95% probability intervals of the numbers of independent samples per minute (ISM) of MCMC algorithms are displayed in a caterpillar plot. The best, or least inefficient, MCMC algorithm is the algorithm with the highest ISM.

For more information, see the Juxtapose function.

Author(s)

See Also


LaplacesDemon

Complete Environment for Bayesian Inference

v16.1.4
MIT + file LICENSE
Authors
Byron Hall [aut], Martina Hall [aut], Statisticat, LLC [aut], Eric Brown [ctb], Richard Hermanson [ctb], Emmanuel Charpentier [ctb], Daniel Heck [ctb], Stephane Laurent [ctb], Quentin F. Gronau [ctb], Henrik Singmann [cre]
Initial release

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