Adjusts p-values within an HPDsummary() object for multiple comparisons
Replaces raw p-values in an object returned by HPDsummary() by adjusted p-values corrected for multiple comparisons. Disregards the entries corresponding to control genes.
padj.hpdsummary(hpdsumm, controls = NULL, method = "BH")
hpdsumm |
Output of HPDsummary() |
controls |
A vector of control gene names |
method |
p-value correction method (see function p.adjust), default is Benjamini-Hochberg |
HPDsummary object with original p-values replaced by the corrected ones.
Mikhail V. Matz, matz@mail.utexas.edu
Matz MV, Wright RM, Scott JG (2013) No Control Genes Required: Bayesian Analysis of qRT-PCR Data. PLoS ONE 8(8): e71448. doi:10.1371/journal.pone.0071448
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