Write a distance table to a file in nexus format
Write a distance table to a file in nexus format.
nexusDist(distMatrix, outfilename)
distMatrix |
a square matrix giving a distance table, with rows and columns labeled by taxon names |
outfilename |
the name of an output file |
gtrees=read.tree(file=system.file("extdata","dataGeneTreeSample",package="MSCquartets"))
tnames=taxonNames(gtrees)
QT=quartetTable(gtrees,tnames[1:6])
RQT=quartetTableResolved(QT)
DQT=quartetTableDominant(RQT)
Dist=quartetDist(DQT)
nexusDist(Dist,outfile = file.path(tempdir(), "NANUQdist"))Please choose more modern alternatives, such as Google Chrome or Mozilla Firefox.