MSCquartets: taxonNames – R documentation

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taxonNames

Get all taxon names from a collection of trees

Create a vector of all taxon names appearing on a collection of trees, with no repeats.

taxonNames(trees)

trees

a multiPhylo object containing a collection of trees

a vector of unique names of taxa appearing on the trees

gtrees=read.tree(file=system.file("extdata","dataGeneTreeSample",package="MSCquartets"))
tnames=taxonNames(gtrees)

Analyzing Gene Tree Quartets under the Multi-Species Coalescent

v1.1.0

MIT + file LICENSE

Authors

Elizabeth Allman [aut], Hector Banos [aut], Jonathan Mitchell [aut], John Rhodes [aut, cre] (<https://orcid.org/0000-0001-9921-1091>)

Initial release