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PCoABootstrap

Plots an object of class PCoABootstrap

Description

Plots an object of class PCoABootstrap

Usage

## S3 method for class 'PCoABootstrap'
plot(x, F1=1, F2=2, Move2Center=TRUE, 
BootstrapPlot="Ellipse", confidence=0.95, Colors=NULL, ...)

Arguments

x

An object of class "PCoABootstrap"

F1

First dimension to plot

F2

Second dimension to plot

Move2Center

Translate the ellipse center to the coordinates

BootstrapPlot

Type of Bootstrap plot to draw: "Ellipse", "ConvexHull", "Star"

confidence

Confidence level for the bootstrap plot

Colors

Colors of the objects

...

Additional parameters for graphical representations

Details

Draws the bootstrap confidence regions for the coordinates of the points obtained from a Principal Coodinates Analysis

Value

No value returned

Author(s)

Jose Luis Vicente Villardon

References

J.R. Demey, J.L. Vicente-Villardon, M.P. Galindo, A.Y. Zambrano, Identifying molecular markers associated with classifications of genotypes by external logistic biplot, Bioinformatics 24 (2008) 2832.

Examples

data(spiders)
Dis=BinaryProximities(spiders)
pco=PrincipalCoordinates(Dis, Bootstrap=TRUE, BootstrapType="Products")
plot(pco, Bootstrap=TRUE)
MultBiplotR

Multivariate Analysis Using Biplots in R

v1.3.30
GPL (>= 2)
Authors
Jose Luis Vicente-Villardon
Initial release
2021-03-30

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