Plots the principal coordinates of the group centers and the bootstrap confidence regions
Plots the principal coordinates of the group centers and the bootstrap confidence regions.
## S3 method for class 'BootCanonAnalysis' plot(x, A1 = 1, A2 = 2, centred = FALSE, confidence = 0.9, PlotReplicates = TRUE, MeanCex = 1.5, MeanPch = 16, Title = "Bootstrap Canonical Analysis based on Distances", LabelMeans = TRUE, MeanLabels = NULL, MeanColors = NULL, SmartLabels = TRUE, BootstrapPlot = "el", PlotIndiv = FALSE, LabelInd = FALSE, IndLabels = NULL, IndColors = NULL, CexInd = 0.5, PchInd = 1, ConvexHullsInd = FALSE, ...)
x |
The object to plot. |
A1 |
Dimension to plot on the X axis. |
A2 |
Dimension to plot on the Y axis. |
centred |
Plot centers of the bootstrap regions. |
confidence |
Confidence for the bootstrap regions. |
PlotReplicates |
Should all the bootstrap replicates be plotted. |
MeanCex |
Size of the points and text representing the centroids of the groups. |
MeanPch |
Marks of the points and text representing the centroids of the groups. |
Title |
Main title of the graph. |
LabelMeans |
Should the groups be labelled? |
MeanLabels |
Labels for the group means. |
MeanColors |
Colors for the group means. |
SmartLabels |
Should the labels be placed in a smart way? |
BootstrapPlot |
Should the bootstrap regions be plotted? |
PlotIndiv |
Should the individuals be plotted? |
LabelInd |
Should individuals be labelled? |
IndLabels |
Labels for the individuals. |
IndColors |
Colors for the rows (individuals). |
CexInd |
Sizes for the rows (individuals). |
PchInd |
Marks for the rows (individuals). |
ConvexHullsInd |
Convex hulls containing the individuals of each group. |
... |
Any other graphical parameters. |
Plots the principal coordinates of the means of the groups with the confidence bootstrap region.
The plot.
Laura Vicente-Gonzalez, Jose Luis Vicente-Villardon
Please choose more modern alternatives, such as Google Chrome or Mozilla Firefox.