RCy3: commandRunFile – R documentation

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commandRunFile

Command Run File

Description

The run command will execute a command script from the file pointed to by the file argument, which should contain Cytoscape commands, one per line. Arguments to the script are provided by the args argument

Usage

commandRunFile(file, args = NULL, base.url = .defaultBaseUrl)

Arguments

`file`	Path to command script file
`args`	The script arguments as key:value pairs separated by commas
`base.url`	(optional) Ignore unless you need to specify a custom domain, port or version to connect to the CyREST API. Default is http://localhost:1234 and the latest version of the CyREST API supported by this version of RCy3.

Value

None

Examples

commandRunFile('/path/to/my/file.txt')

RCy3

Functions to Access and Control Cytoscape

v2.10.2

MIT + file LICENSE

Authors

Alex Pico [aut, cre] (<https://orcid.org/0000-0001-5706-2163>), Tanja Muetze [aut], Paul Shannon [aut], Ruth Isserlin [ctb], Shraddha Pai [ctb], Julia Gustavsen [ctb], Georgi Kolishovski [ctb]

Initial release

2020-11-18