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setEdgeLabelOpacityMapping

Set Edge Label Opacity Mapping


Description

Sets opacity for edge label only.

Usage

setEdgeLabelOpacityMapping(
  table.column,
  table.column.values = NULL,
  opacities = NULL,
  mapping.type = "c",
  default.opacity = NULL,
  style.name = NULL,
  network = NULL,
  base.url = .defaultBaseUrl
)

Arguments

table.column

Name of Cytoscape table column to map values from

table.column.values

List of values from Cytoscape table to be used in mapping

opacities

(integer) values between 0 and 255; 0 is invisible

mapping.type

(char) continuous, discrete or passthrough (c,d,p); default is continuous

default.opacity

Opacity value to set as default for all unmapped values

style.name

Name of style; default is "default" style

network

(optional) Name or SUID of the network. Default is the "current" network active in Cytoscape. port or version to connect to the CyREST API. Default is http://localhost:1234 and the latest version of the CyREST API supported by this version of RCy3.

base.url

(optional) Ignore unless you need to specify a custom domain, port or version to connect to the CyREST API. Default is http://localhost:1234 and the latest version of the CyREST API supported by this version of RCy3.

Value

None

Examples

setEdgeLabelOpacityMapping ('weight', c(1,10), c(50,255))

RCy3

Functions to Access and Control Cytoscape

v2.10.2
MIT + file LICENSE
Authors
Alex Pico [aut, cre] (<https://orcid.org/0000-0001-5706-2163>), Tanja Muetze [aut], Paul Shannon [aut], Ruth Isserlin [ctb], Shraddha Pai [ctb], Julia Gustavsen [ctb], Georgi Kolishovski [ctb]
Initial release
2020-11-18

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