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RISmed

Download Content from NCBI Databases

A set of tools to extract bibliographic content from the National Center for Biotechnology Information (NCBI) databases, including PubMed. The name RISmed is a portmanteau of RIS (for Research Information Systems, a common tag format for bibliographic data) and PubMed.

Functions (178)

AbstractText

Extracts AbstractText from Medline object.

AbstractText-methods

~~ Methods for Function AbstractText in Package RISmed ~~

Acronym

Extracts Acronym from Medline object.

Acronym-methods

~~ Methods for Function Acronym in Package RISmed ~~

Affiliation

Extracts Affiliation from Medline object.

Affiliation-methods

~~ Methods for Function Affiliation in Package RISmed ~~

Agency

Extracts Agency from Medline object.

Agency-methods

~~ Methods for Function Agency in Package RISmed ~~

ArticleId

Extracts ArticleId from Medline object.

ArticleId-methods

~~ Methods for Function ArticleId in Package RISmed ~~

ArticleTitle

Extracts ArticleTitle from Medline object.

ArticleTitle-methods

~~ Methods for Function ArticleTitle in Package RISmed ~~

Author

Extracts Author from Medline object.

Author-methods

~~ Methods for Function Author in Package RISmed ~~

COIStatement

Extracts COIStatement from Medline object.

COIStatement-methods

~~ Methods for Function COIStatement in Package RISmed ~~

Cited

Number of citations

Cited-methods

~~ Methods for Function Cited in Package RISmed ~~

CollectiveName

Extracts CollectiveName from Medline object.

CollectiveName-methods

~~ Methods for Function CollectiveName in Package RISmed ~~

CopyrightInformation

Extracts CopyrightInformation from Medline object.

CopyrightInformation-methods

~~ Methods for Function CopyrightInformation in Package RISmed ~~

Country

Extracts Country from Medline object.

Country-methods

~~ Methods for Function Country in Package RISmed ~~

DOI

Extracts DOI from Medline object.

DOI-methods

~~ Methods for Function DOI in Package RISmed ~~

DayAccepted

Extracts DayAccepted from Medline object.

DayAccepted-methods

~~ Methods for Function DayAccepted in Package RISmed ~~

DayArticleDate

Extracts DayArticleDate from Medline object.

DayArticleDate-methods

~~ Methods for Function DayArticleDate in Package RISmed ~~

DayEntrez

Extracts DayEntrez from Medline object.

DayEntrez-methods

~~ Methods for Function DayEntrez in Package RISmed ~~

DayEpublish

Extracts DayEpublish from Medline object.

DayEpublish-methods

~~ Methods for Function DayEpublish in Package RISmed ~~

DayMedline

Extracts DayMedline from Medline object.

DayMedline-methods

~~ Methods for Function DayMedline in Package RISmed ~~

DayPmc

Extracts DayPmc from Medline object.

DayPmc-methods

~~ Methods for Function DayPmc in Package RISmed ~~

DayPpublish

Extracts DayPpublish from Medline object.

DayPpublish-methods

~~ Methods for Function DayPpublish in Package RISmed ~~

DayPubDate

Extracts DayPubDate from Medline object.

DayPubDate-methods

~~ Methods for Function DayPubDate in Package RISmed ~~

DayPubmed

Extracts DayPubmed from Medline object.

DayPubmed-methods

~~ Methods for Function DayPubmed in Package RISmed ~~

DayReceived

Extracts DayReceived from Medline object.

DayReceived-methods

~~ Methods for Function DayReceived in Package RISmed ~~

DayRevised

Extracts DayRevised from Medline object.

DayRevised-methods

~~ Methods for Function DayRevised in Package RISmed ~~

ELocationID

Extracts ELocationID from Medline object.

ELocationID-methods

~~ Methods for Function ELocationID in Package RISmed ~~

EUtilsGet

Results of an NCBI EUtils query

EUtilsQuery

Construct URL to make NCBI EUtils query

EUtilsSummary

Get summary of NCBI EUtils query

EUtilsSummary-class

Class "EUtilsSummary"

GrantID

Extracts GrantID from Medline object.

GrantID-methods

~~ Methods for Function GrantID in Package RISmed ~~

HourAccepted

Extracts HourAccepted from Medline object.

HourAccepted-methods

~~ Methods for Function HourAccepted in Package RISmed ~~

HourEntrez

Extracts HourEntrez from Medline object.

HourEntrez-methods

~~ Methods for Function HourEntrez in Package RISmed ~~

HourEpublish

Extracts HourEpublish from Medline object.

HourEpublish-methods

~~ Methods for Function HourEpublish in Package RISmed ~~

HourMedline

Extracts HourMedline from Medline object.

HourMedline-methods

~~ Methods for Function HourMedline in Package RISmed ~~

HourPmc

Extracts HourPmc from Medline object.

HourPmc-methods

~~ Methods for Function HourPmc in Package RISmed ~~

HourPpublish

Extracts HourPpublish from Medline object.

HourPpublish-methods

~~ Methods for Function HourPpublish in Package RISmed ~~

HourPubmed

Extracts HourPubmed from Medline object.

HourPubmed-methods

~~ Methods for Function HourPubmed in Package RISmed ~~

HourReceived

Extracts HourReceived from Medline object.

HourReceived-methods

~~ Methods for Function HourReceived in Package RISmed ~~

ISOAbbreviation

Extracts ISOAbbreviation from Medline object.

ISOAbbreviation-methods

~~ Methods for Function ISOAbbreviation in Package RISmed ~~

ISSN

Extracts ISSN from Medline object.

ISSN-methods

~~ Methods for Function ISSN in Package RISmed ~~

ISSNLinking

Extracts ISSNLinking from Medline object.

ISSNLinking-methods

~~ Methods for Function ISSNLinking in Package RISmed ~~

Issue

Extracts Issue from Medline object.

Issue-methods

~~ Methods for Function Issue in Package RISmed ~~

Language

Extracts Language from Medline object.

Language-methods

~~ Methods for Function Language in Package RISmed ~~

Medline

Class "Medline"

MedlinePgn

Extracts MedlinePgn from Medline object.

MedlinePgn-methods

~~ Methods for Function MedlinePgn in Package RISmed ~~

MedlineTA

Extracts MedlineTA from Medline object.

MedlineTA-methods

~~ Methods for Function MedlineTA in Package RISmed ~~

Mesh

Extracts Mesh headings from Medline object.

Mesh-methods

~~ Methods for Function Mesh in Package RISmed ~~

MinuteAccepted

Extracts MinuteAccepted from Medline object.

MinuteAccepted-methods

~~ Methods for Function MinuteAccepted in Package RISmed ~~

MinuteEntrez

Extracts MinuteEntrez from Medline object.

MinuteEntrez-methods

~~ Methods for Function MinuteEntrez in Package RISmed ~~

MinuteEpublish

Extracts MinuteEpublish from Medline object.

MinuteEpublish-methods

~~ Methods for Function MinuteEpublish in Package RISmed ~~

MinuteMedline

Extracts MinuteMedline from Medline object.

MinuteMedline-methods

~~ Methods for Function MinuteMedline in Package RISmed ~~

MinutePmc

Extracts MinutePmc from Medline object.

MinutePmc-methods

~~ Methods for Function MinutePmc in Package RISmed ~~

MinutePpublish

Extracts MinutePpublish from Medline object.

MinutePpublish-methods

~~ Methods for Function MinutePpublish in Package RISmed ~~

MinutePubmed

Extracts MinutePubmed from Medline object.

MinutePubmed-methods

~~ Methods for Function MinutePubmed in Package RISmed ~~

MinuteReceived

Extracts MinuteReceived from Medline object.

MinuteReceived-methods

~~ Methods for Function MinuteReceived in Package RISmed ~~

MonthAccepted

Extracts MonthAccepted from Medline object.

MonthAccepted-methods

~~ Methods for Function MonthAccepted in Package RISmed ~~

MonthArticleDate

Extracts MonthArticleDate from Medline object.

MonthArticleDate-methods

~~ Methods for Function MonthArticleDate in Package RISmed ~~

MonthEntrez

Extracts MonthEntrez from Medline object.

MonthEntrez-methods

~~ Methods for Function MonthEntrez in Package RISmed ~~

MonthEpublish

Extracts MonthEpublish from Medline object.

MonthEpublish-methods

~~ Methods for Function MonthEpublish in Package RISmed ~~

MonthMedline

Extracts MonthMedline from Medline object.

MonthMedline-methods

~~ Methods for Function MonthMedline in Package RISmed ~~

MonthPmc

Extracts MonthPmc from Medline object.

MonthPmc-methods

~~ Methods for Function MonthPmc in Package RISmed ~~

MonthPpublish

Extracts MonthPpublish from Medline object.

MonthPpublish-methods

~~ Methods for Function MonthPpublish in Package RISmed ~~

MonthPubDate

Extracts MonthPubDate from Medline object.

MonthPubDate-methods

~~ Methods for Function MonthPubDate in Package RISmed ~~

MonthPubmed

Extracts MonthPubmed from Medline object.

MonthPubmed-methods

~~ Methods for Function MonthPubmed in Package RISmed ~~

MonthReceived

Extracts MonthReceived from Medline object.

MonthReceived-methods

~~ Methods for Function MonthReceived in Package RISmed ~~

MonthRevised

Extracts MonthRevised from Medline object.

MonthRevised-methods

~~ Methods for Function MonthRevised in Package RISmed ~~

NlmUniqueID

Extracts NlmUniqueID from Medline object.

NlmUniqueID-methods

~~ Methods for Function NlmUniqueID in Package RISmed ~~

PMID

Extracts PMID from Medline object.

PMID-methods

~~ Methods for Function PMID in Package RISmed ~~

PublicationStatus

Extracts PublicationStatus from Medline object.

PublicationStatus-methods

~~ Methods for Function PublicationStatus in Package RISmed ~~

PublicationType

Extracts PublicationType from Medline object.

PublicationType-methods

~~ Methods for Function PublicationType in Package RISmed ~~

Query

Extract Query from Medline object.

Query-methods

~~ Methods for Function Query in Package RISmed ~~

RISmed-package

Download content from NCBI databases.

RefSource

Extracts RefSource from Medline object.

RefSource-methods

~~ Methods for Function RefSource in Package RISmed ~~

RegistryNumber

Extracts RegistryNumber from Medline object.

RegistryNumber-methods

~~ Methods for Function RegistryNumber in Package RISmed ~~

Title

Extracts Title from Medline object.

Title-methods

~~ Methods for Function Title in Package RISmed ~~

Volume

Extracts Volume from Medline object.

Volume-methods

~~ Methods for Function Volume in Package RISmed ~~

YearAccepted

Extracts YearAccepted from Medline object.

YearAccepted-methods

~~ Methods for Function YearAccepted in Package RISmed ~~

YearArticleDate

Extracts YearArticleDate from Medline object.

YearArticleDate-methods

~~ Methods for Function YearArticleDate in Package RISmed ~~

YearEntrez

Extracts YearEntrez from Medline object.

YearEntrez-methods

~~ Methods for Function YearEntrez in Package RISmed ~~

YearEpublish

Extracts YearEpublish from Medline object.

YearEpublish-methods

~~ Methods for Function YearEpublish in Package RISmed ~~

YearMedline

Extracts YearMedline from Medline object.

YearMedline-methods

~~ Methods for Function YearMedline in Package RISmed ~~

YearPmc

Extracts YearPmc from Medline object.

YearPmc-methods

~~ Methods for Function YearPmc in Package RISmed ~~

YearPpublish

Extracts YearPpublish from Medline object.

YearPpublish-methods

~~ Methods for Function YearPpublish in Package RISmed ~~

YearPubDate

Extracts YearPubDate from Medline object.

YearPubDate-methods

~~ Methods for Function YearPubDate in Package RISmed ~~

YearPubmed

Extracts YearPubmed from Medline object.

YearPubmed-methods

~~ Methods for Function YearPubmed in Package RISmed ~~

YearReceived

Extracts YearReceived from Medline object.

YearReceived-methods

~~ Methods for Function YearReceived in Package RISmed ~~

YearRevised

Extracts YearRevised from Medline object.

YearRevised-methods

~~ Methods for Function YearRevised in Package RISmed ~~

c-methods

Concatenate Medline

count

Count of record results for EUtilsQuery

id

Get ids from EUtilsQuery

myeloma

Example of results from EUtilsGet

print

Print method for EUtilsSummary object

print-method

Print method for Medline object

show-Medline-methods

Show method for Medline object

show-methods

Show method for EUtilsSummary object

summary-methods

Summary method for EUtilsSummary object

translation

Get the NCBI query translation from EUtilsQuery

RISmed

Download Content from NCBI Databases

v2.2
GPL (>= 2)
Authors
Stephanie Kovalchik [aut, cre]
Initial release
2020-10-29

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