Extracts the realized autozygosity from the zres object
Extracts the realized autozygosity from the zres object. Extraction is performed for the indicated classes (all by default) and names are added to the columns.
realized(zres, classNum = NULL)
zres |
The name of the zres object created by the zoorun function. |
classNum |
An array with the number of the classes to extract. All classes are extracted by default. |
The function returns a data frame with one row per individual and one column per extracted classes. In addition, it gives names to the columns. For a pre-defined model, the names of HBD classes are "R_X" where X is the rate of the corresponding class. For a model with rate estimation, the names of the HBD classes are "HBDclassX" where X is the number of the HBD class. For non-HBD classes, we use "NonHBD".
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