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typs

Subset of a dataset with genotypes for 6 individuals from a cattle population.


Description

A dataset containing real genotypes for 6 individuals. Genotypes are available for a low density array with 6370 SNPs on 29 autosomes. The six last columns correspond to the genotypes. Missing genotypes are set to 9.

Usage

typs

Format

A data frame with 6370 rows and 10 variables:

chr

The chromosome number

pos

The position of the marker

allele1

The name of the first marker allele

allele2

The name of the second marker allele

id1

The genotypes for the first individuals (id1)

id2

The genotypes for the second individuals (id2)

id3

The genotypes for the third individuals (id3)

id4

The genotypes for the fourth individuals (id4)

id5

The genotypes for the fifth individuals (id5)

id6

The genotypes for the sixth individuals (id6)


RZooRoH

Partitioning of Individual Autozygosity into Multiple Homozygous-by-Descent Classes

v0.3.0
GPL-3
Authors
Tom Druet, Naveen Kumar Kadri, Amandine Bertrand and Mathieu Gautier
Initial release

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