Class "Ragraph": A class to handle libgraph representations
Class Ragraph is used to handle libgraph
representations of R graph objects.
Objects can be created by calls to the function agopen.
agraph:Object of class "externalptr": A C
based structure containing the libgraph information
laidout:Object of class "logical": Whether or
not this graph has been laid out or not.
layoutType:Object of class "character": The
layout method used for this object
edgemode:Object of class "character": The
edgemode for this graph - “directed” or
“undirected”
AgNode:Object of class "list": A list of
AgNode objects.
AgEdge:Object of class "list": A list of
AgEdge objects.
boundBox:Object of class "boundBox": Defines
the bounding box of the plot.
bg:Object of class "character": The background
color.
fg:Object of class "character": The foreground
color.
signature(object = "Ragraph"): A brief summary of
the contents
signature(object = "Ragraph"): Returns the
external libgraph pointer
signature(object = "Ragraph"): Returns the
laidout slot
signature(object = "Ragraph"): Returns the
bounding box.
signature(object = "Ragraph"): Returns the edge
list.
signature(object = "Ragraph"): Returns the node
list.
signature(object = "Ragraph"): Retrieves the
edgemode of this object.
signature(object = "Ragraph"): Retrieves the
method used for the layout of this graph.
signature(object = "Ragraph"): Returns a
vector of the names of the edges in this graph.
signature(self= "Ragraph"):
Gets default attributes of the given graph.
signature(self= "Ragraph", attr="vector", value="vector"):
Sets default attributes of the given graph.
signature(self= "Ragraph", attr="vector"):
Gets attributes of the given graph.
signature(self= "Ragraph", attr="vector", value="vector"):
Sets attributes of the given graph.
signature(self= "Ragraph", cluster="numeric", attr="vector"):
Gets attributes of a cluster for the given graph.
signature(self= "Ragraph", cluster="numeric", attr="vector", value="vector"):
Sets attributes of a cluster for the given graph.
signature(self= "Ragraph",attr="missing"):
Gets default attributes of the given edge.
signature(self= "Ragraph", attr="vector", value="vector"):
Sets default attributes of the given edge.
signature(self= "Ragraph", from="vector", to="vector", attr="vector"):
Gets attributes of the given edge.
signature(self= "Ragraph", from="vector", to="vector", attr="vector", value="vector"):
Sets attributes of the given edge.
signature(self= "Ragraph",attr="missing"):
Gets default attributes of the given node.
signature(self= "Ragraph", attr="vector", value="vector"):
Sets default attributes of the given node.
signature(self= "Ragraph", n="vector", attr="vector"):
Gets attributes of the given node.
signature(self= "Ragraph", n="vector", attr="vector", value="vector"):
Sets attributes of the given node.
signature(object = "Ragraph"): Returns a two
element list, the first element contains a numerical vector with
the 'x' positions of every node in this graph, and the second
element contains a numerical vector with the 'y' positions for
every node in the graph.
signature(object = "Ragraph"): Returns a
vector with the heights of every node in the graph
signature(object = "Ragraph"): Returns a
vector with the left width of every node in the graph.
signature(object = "Ragraph"): Returns a
vector with the right width of every node in the graph.
Jeff Gentry and Li Long <li.long@isb-sib.ch>
set.seed(123) V <- letters[1:10] M <- 1:4 g1 <- randomGraph(V, M, .2) z <- agopen(g1,"foo") z ## The various methods in action ## These methods are all used to obtain positional information about nodes getNodeXY(z) getNodeHeight(z) getNodeLW(z) getNodeRW(z) ## Retrieve information about the edges in the graph edgeNames(z) edgemode(z) ## These get information about the layout laidout(z) layoutType(z) boundBox(z) ## Used to retrieve the entire list of edges or nodes AgEdge(z) AgNode(z)
Please choose more modern alternatives, such as Google Chrome or Mozilla Firefox.