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Spec1rProcpar

Spec1rProcpar


Description

Initialize Parameter Lists by the default ones

Usage

Spec1rProcpar

Format

An object of class list of length 31.

Value

  • DEBUG : Debug - defaut value = TRUE

  • LOGFILE : Messages output file - default value = ""

  • VENDOR : Instrumental origin of the raw data (bruker, varian, jeol, rs2d) - default value = 'bruker'

  • READ_RAW_ONLY : Read Raw file only; do not carry out processing; if raw file is depending on INPUT_SIGNAL - default value = FALSE

  • INPUT_SIGNAL : What type of input signal: 'fid' or '1r' - default value = 'fid'

  • PDATA_DIR : subdirectory containing the 1r file (bruker's format only) - default value = 'pdata/1'

  • LB : Exponantial Line Broadening parameter - default value = 0.3

  • GB : Gaussian Line Broadening parameter - default value = 0

  • REMLFREQ : Remove low frequencies by applying a polynomial subtraction method. - default order of the model = 0

  • REVPPM : Reverse ppm scale - default value = FALSE

  • BLPHC : Number of points for baseline smoothing during phasing - default value = 260

  • KSIG : Number of times the noise signal to be considered during phasing - default value = 6

  • CPMG : Indicate if CPMG sequence - default value = FALSE

  • ZEROFILLING : Zero Filling - - default value = FALSE

  • ZFFAC : Max factor for Zero Filling - default value = 4

  • LINEBROADENING : Line Broading - default value = TRUE

  • TSP : PPM referencing - default value = FALSE

  • RABOT : Zeroing of Negative Values - default value = FALSE

  • OPTPHC0 : Zero order phase optimization - default value = TRUE

  • OPTPHC1 : First order phase optimization - default value = FALSE

  • OPTCRIT1 : Criterium for phasing optimization (1 for SSpos, 2 for SSneg, 3 for Entropy - default value = 3

  • JGD_INNER : JEOL : internal (or external) estimation for Group Delay - default value = TRUE


Rnmr1D

Perform the Complete Processing of a Set of Proton Nuclear Magnetic Resonance Spectra

v1.2.5
GPL (>= 2)
Authors
Daniel Jacob [cre, aut] (<https://orcid.org/0000-0002-6687-7169>), Catherine Deborde [ctb], Marie Lefebvre [ctb]
Initial release
2019-11-25

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