Become an expert in R — Interactive courses, Cheat Sheets, certificates and more!
Get Started for Free

SDMmodel2MaxEnt

SDMmodel2MaxEnt


Description

Converts an SDMmodel object containing a Maxent model into a dismo MaxEnt object.

Usage

SDMmodel2MaxEnt(model)

Arguments

model

SDMmodel object to be converted.

Value

The converted dismo MaxEnt object.

Author(s)

Sergio Vignali

Examples

# Acquire environmental variables
files <- list.files(path = file.path(system.file(package = "dismo"), "ex"),
                    pattern = "grd", full.names = TRUE)
predictors <- raster::stack(files)

# Prepare presence and background locations
p_coords <- virtualSp$presence
bg_coords <- virtualSp$background

# Create SWD object
data <- prepareSWD(species = "Virtual species", p = p_coords, a = bg_coords,
                   env = predictors, categorical = "biome")

# Train a Maxent model
# The next line checks if Maxent is correctly configured but you don't need
# to run it in your script
if (dismo::maxent(silent = TRUE)) {
model <- train(method = "Maxent", data = data, fc = "l")

dismo_model <- SDMmodel2MaxEnt(model)
dismo_model
}

SDMtune

Species Distribution Model Selection

v1.1.4
GPL-3
Authors
Sergio Vignali [aut, cre] (<https://orcid.org/0000-0002-3390-5442>), Arnaud Barras [aut] (<https://orcid.org/0000-0003-0850-6965>), Veronika Braunisch [aut] (<https://orcid.org/0000-0001-7035-4662>), Conservation Biology - University of Bern [fnd]
Initial release

We don't support your browser anymore

Please choose more modern alternatives, such as Google Chrome or Mozilla Firefox.