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maxentTh

MaxEnt Thresholds


Description

Returns the value of the thresholds generated by the MaxEnt software.

Usage

maxentTh(model)

Arguments

model

SDMmodel object trained using the "Maxent" method.

Value

data.frame with the thresholds.

Author(s)

Sergio Vignali

See Also

Examples

# Acquire environmental variables
files <- list.files(path = file.path(system.file(package = "dismo"), "ex"),
                    pattern = "grd", full.names = TRUE)
predictors <- raster::stack(files)

# Prepare presence and background locations
p_coords <- virtualSp$presence
bg_coords <- virtualSp$background

# Create SWD object
data <- prepareSWD(species = "Virtual species", p = p_coords, a = bg_coords,
                   env = predictors, categorical = "biome")

# Train a Maxent model
# The next line checks if Maxent is correctly configured but you don't need
# to run it in your script
if (dismo::maxent(silent = TRUE)) {
model <- train(method = "Maxent", data = data, fc = "l")
maxentTh(model)
}

SDMtune

Species Distribution Model Selection

v1.1.4
GPL-3
Authors
Sergio Vignali [aut, cre] (<https://orcid.org/0000-0002-3390-5442>), Arnaud Barras [aut] (<https://orcid.org/0000-0003-0850-6965>), Veronika Braunisch [aut] (<https://orcid.org/0000-0001-7035-4662>), Conservation Biology - University of Bern [fnd]
Initial release

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