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FWEminP

FWE Adjustment Using Permutation

Description

FWE Adjustment Using Permutation and NPC

Usage

FWEminP(Pmat)

Arguments

Pmat

matrix of p-values where comparisons are on the columns

Details

Multiplicity correction controlling the Family-Wise Error using the permutation p-values and NonParametric Combination with minP as combining function.

Value

numeric vector of corrected p.values

Author(s)

Dario Basso and Federico Mattiello <federico.mattiello@gmail.com>

References

Pesarin, F. and Salmaso, L. (2010) Permutation Tests for Complex Data. Wiley: United Kingdom

Finos, L. and Pesarin, F. and Salmaso, L. (2003) Test combinati per il controllo della molteplicit\'a mediante procedure di closed testing, Statistica Applicata, 15, 301–329.

See Also

Examples

set.seed(123)
P <- matrix(runif(1010), nrow = 101, ncol = 10,
  dimnames = list(c("p-obs", paste("p-*", 1L:100)), LETTERS[1L:10]))
P[1L, 1L:4] <- 1/100
FWEminP(P)
SOUP

Stochastic Ordering Using Permutations (and Pairwise Comparisons)

v1.1
GPL (>= 2)
Authors
Federico Mattiello [aut, cre]
Initial release
2015-04-03

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