Description

SOUP Main Object

Details

Contains the main results of the SOUP analysis

Objects from the Class

Objects can be created by calls of the form new("SoupObject", ...). It contains all results from the analysis performed by the SOUP function.

Slots

call:

a call object that contains the call of the SOUP main function

pValueMat:

PValueMat object containing univariate p-values

rankResults:

RankResults object containing the results of the ranking

permSpace:

PermSpace object containing the permutation spaces

Methods

show

signature(object = "SoupObject"): shows only the main information (on screen) for the object

print

signature(x = "SoupObject"): It prints the whole object on screen (mostly useful for external saving)

Author(s)

Federico Mattiello <federico.mattiello@gmail.com>

Examples