Seurat: AugmentPlot – R documentation

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AugmentPlot

Augments ggplot2-based plot with a PNG image.

Description

Creates "vector-friendly" plots. Does this by saving a copy of the plot as a PNG file, then adding the PNG image with annotation_raster to a blank plot of the same dimensions as plot. Please note: original legends and axes will be lost during augmentation.

Usage

AugmentPlot(plot, width = 10, height = 10, dpi = 100)

Arguments

`plot`	A ggplot object
`width, height`	Width and height of PNG version of plot
`dpi`	Plot resolution

Value

A ggplot object

Examples

## Not run: 
data("pbmc_small")
plot <- DimPlot(object = pbmc_small)
AugmentPlot(plot = plot)

## End(Not run)

Seurat

Tools for Single Cell Genomics

v4.0.1

GPL-3 | file LICENSE

Authors

Andrew Butler [ctb] (<https://orcid.org/0000-0003-3608-0463>), Saket Choudhary [ctb] (<https://orcid.org/0000-0001-5202-7633>), Charlotte Darby [ctb] (<https://orcid.org/0000-0003-2195-5300>), Jeff Farrell [ctb], Christoph Hafemeister [ctb] (<https://orcid.org/0000-0001-6365-8254>), Yuhan Hao [ctb] (<https://orcid.org/0000-0002-1810-0822>), Paul Hoffman [aut, cre] (<https://orcid.org/0000-0002-7693-8957>), Jaison Jain [ctb] (<https://orcid.org/0000-0002-9478-5018>), Efthymia Papalexi [ctb] (<https://orcid.org/0000-0001-5898-694X>), Patrick Roelli [ctb], Rahul Satija [ctb] (<https://orcid.org/0000-0001-9448-8833>), Karthik Shekhar [ctb], Avi Srivastava [ctb] (<https://orcid.org/0000-0001-9798-2079>), Tim Stuart [ctb] (<https://orcid.org/0000-0002-3044-0897>), Kristof Torkenczy [ctb] (<https://orcid.org/0000-0002-4869-7957>), Shiwei Zheng [ctb] (<https://orcid.org/0000-0001-6682-6743>), Satija Lab and Collaborators [fnd]

Initial release

2021-03-17