Cell Selector
Select points on a scatterplot and get information about them
CellSelector(plot, object = NULL, ident = "SelectedCells", ...) FeatureLocator(plot, ...)
plot |
A ggplot2 plot |
object |
An optional Seurat object; if passes, will return an object
with the identities of selected cells set to |
ident |
An optional new identity class to assign the selected cells |
... |
Ignored |
If object is NULL, the names of the points selected;
otherwise, a Seurat object with the selected cells identity classes set to
ident
## Not run:
data("pbmc_small")
plot <- DimPlot(object = pbmc_small)
# Follow instructions in the terminal to select points
cells.located <- CellSelector(plot = plot)
cells.located
# Automatically set the identity class of selected cells and return a new Seurat object
pbmc_small <- CellSelector(plot = plot, object = pbmc_small, ident = 'SelectedCells')
## End(Not run)Please choose more modern alternatives, such as Google Chrome or Mozilla Firefox.