Get and set feature loadings
Get and set feature loadings
Loadings(object, ...) Loadings(object, ...) <- value ## S3 method for class 'DimReduc' Loadings(object, projected = FALSE, ...) ## S3 replacement method for class 'DimReduc' Loadings(object, projected = TRUE, ...) <- value ## S3 method for class 'Seurat' Loadings(object, reduction = "pca", projected = FALSE, ...)
object |
An object |
... |
Arguments passed to other methods |
value |
Feature loadings to add |
projected |
Pull the projected feature loadings? |
reduction |
Name of reduction to pull feature loadings for |
Loadings: the feature loadings for object
Loadings<-: object with the updated loadings
# Get the feature loadings for a given DimReduc Loadings(object = pbmc_small[["pca"]])[1:5,1:5] # Set the feature loadings for a given DimReduc new.loadings <- Loadings(object = pbmc_small[["pca"]]) new.loadings <- new.loadings + 0.01 Loadings(object = pbmc_small[["pca"]]) <- new.loadings # Get the feature loadings for a specified DimReduc in a Seurat object Loadings(object = pbmc_small, reduction = "pca")[1:5,1:5]
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