ShortRead: AlignedDataFrame – R documentation

Become an expert in R — Interactive courses, Cheat Sheets, certificates and more!

AlignedDataFrame

(Legacy) AlignedDataFrame constructor

Construct an AlignedDataFrame from a data frame and its metadata

AlignedDataFrame(data, metadata, nrow = nrow(data))

`data`	A data frame containing alignment information.
`metadata`	A data frame describing the columns of `data`, and with number of rows of `metadata` corresponding to number of columns of `data`. . The data frame must contain a column `labelDescription` providing a verbose description of each column of `data`.
`nrow`	An optional argument, to be used when `data` is not provided, to construct an AlignedDataFrame with the specified number of rows.

Martin Morgan <mtmorgan@fhcrc.org>

FASTQ input and manipulation

v1.48.0

Artistic-2.0

Authors

Martin Morgan, Michael Lawrence, Simon Anders

Initial release