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AverageCounts

Average Counts

Description

Compute the mean counts per group of cells for a given assay

Usage

AverageCounts(object, assay = NULL, group.by = NULL, verbose = TRUE)

Arguments

object

A Seurat object
assay

Name of assay to use. Default is the active assay
group.by

Grouping variable to use. Default is the active identities
verbose

Display messages

Value

Returns a dataframe

Examples

AverageCounts(atac_small)
Signac

Analysis of Single-Cell Chromatin Data

v1.2.1
MIT + file LICENSE
Authors
Tim Stuart [aut, cre] (<https://orcid.org/0000-0002-3044-0897>), Avi Srivastava [aut] (<https://orcid.org/0000-0001-9798-2079>), Paul Hoffman [ctb] (<https://orcid.org/0000-0002-7693-8957>), Rahul Satija [ctb] (<https://orcid.org/0000-0001-9448-8833>)
Initial release
2021-05-11

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