Signac: LookupGeneCoords – R documentation

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LookupGeneCoords

Get gene coordinates

Description

Extract the coordinates of the longest transcript for a gene stored in the annotations within an object.

Usage

LookupGeneCoords(object, gene, assay = NULL)

Arguments

`object`	A Seurat object
`gene`	Name of a gene to extract
`assay`	Name of assay to use

Examples

LookupGeneCoords(atac_small, gene = "MIR1302-10")

Signac

Analysis of Single-Cell Chromatin Data

v1.2.1

MIT + file LICENSE

Authors

Tim Stuart [aut, cre] (<https://orcid.org/0000-0002-3044-0897>), Avi Srivastava [aut] (<https://orcid.org/0000-0001-9798-2079>), Paul Hoffman [ctb] (<https://orcid.org/0000-0002-7693-8957>), Rahul Satija [ctb] (<https://orcid.org/0000-0001-9448-8833>)

Initial release

2021-05-11