Signac: UnifyPeaks – R documentation

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UnifyPeaks

Unify genomic ranges

Description

Create a unified set of non-overlapping genomic ranges from multiple Seurat objects containing single-cell chromatin data.

Usage

UnifyPeaks(object.list, mode = "reduce")

Arguments

`object.list`	A list of Seurat objects or ChromatinAssay objects
`mode`	Function to use when combining genomic ranges. Can be "reduce" (default) or "disjoin". See `reduce` and `disjoin` for more information on these functions.

Value

Returns a GRanges object

Examples

UnifyPeaks(object.list = list(atac_small, atac_small))

Signac

Analysis of Single-Cell Chromatin Data

v1.2.1

MIT + file LICENSE

Authors

Tim Stuart [aut, cre] (<https://orcid.org/0000-0002-3044-0897>), Avi Srivastava [aut] (<https://orcid.org/0000-0001-9798-2079>), Paul Hoffman [ctb] (<https://orcid.org/0000-0002-7693-8957>), Rahul Satija [ctb] (<https://orcid.org/0000-0001-9448-8833>)

Initial release

2021-05-11