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CID.LoadData

Load data file from directory


Description

Loads 'matrix.mtx' and 'genes.txt' files from a directory.

Usage

CID.LoadData(data.dir, mfn = "matrix.mtx")

Arguments

data.dir

Directory containing matrix.mtx and genes.txt.

mfn

file name; default is 'matrix.mtx'

Value

A sparse matrix with rownames equivalent to the names in genes.txt

Examples

## Not run: 
# Loads data from SPRING

# dir is your path to the "categorical_coloring_data.json" file
dir = "./FullDataset_v1"

# load expression data
E = CID.LoadData(data.dir = dir)

## End(Not run)

SignacX

Cell Type Identification and Discovery from Single Cell Gene Expression Data

v2.2.0
GPL-3
Authors
Mathew Chamberlain [aut, cre], Virginia Savova [aut], Richa Hanamsagar [aut], Frank Nestle [aut], Emanuele de Rinaldis [aut], Sanofi US [fnd]
Initial release
2021-02-24

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