Quantify, profile and remove ambient mRNA contamination (the "soup") from droplet based single cell RNA-seq experiments.  Implements the method described in Young et al. (2018) <doi:10.1101/303727>.

Single Cell mRNA Soup eXterminator

package-ubuntu-20.04-r-4.0.5#cran#SoupX-1.5.2

<p>Prints a summary of a SoupChannel object.
</p>

## S3 method for class 'SoupChannel'
print(x, ...)

<table summary="R argblock">
<tr valign="top">
<td><code>x</code></td>
<td>
<p>A SoupChannel object.</p>
</td>
</tr>
<tr valign="top">
<td><code>...</code></td>
<td>
<p>Currently unused.</p>
</td>
</tr>
</table>

<p>Nothing.  Prints message to console.
</p>

package-ubuntu-20.04-r-4.0.5#cran#SoupX-1.5.2#docs#print.SoupChannel

print.SoupChannel

Description

Usage

Arguments

Value

SoupX

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`x`	A SoupChannel object.
`...`	Currently unused.