TIMP

Functions to plot FLIM results.

a problem solving environment for fitting separable nonlinear models in physics and chemistry applications

Class "amp" for diagonal matrix model specification.

Baseline subtraction from a vector, usually representing an IRF.

Class "dat" for model and data storage

Time-resolved absorption data

Plots a matrix with a diverging palette, with the center value of the palettle possible to set

Fluorescent lifetime imaging microscopy (FLIM) data

Fluorescent lifetime imaging microscopy (FLIM) data

covert 'tim' FORTRAN efit files to plain matrices in ASCII files

Examines the results of a call to fitModel

Class "fit" to store the results of model fitting associated with all datasets analyzed.

Performs optimization of (possibly multidataset) models.

Generic function getClpindepX in Package ‘TIMP’

For data correction, fits a model (but ignores plotting commands) in order to obtain the SVD of the residuals, which then can be used in data-correction.

Functions to print and return parts of the object returned by the fitting routines.

Defines the model to be used in analysis.

TIMP function used internally

Class "kin" for kinetic model storage.

Class "kinopt" stores options for fitting and plotting kinetic models

Class "mass" for mass spectrometry model storage.

Class "massopt" stores options for fitting and plotting models for mass spectrometry data

Instrument response for fluorescent lifetime imaging microscopy (FLIM) data

Allows the starting values for parameters associated with a model to be updated with the values found in fitting the model.

Class "multimodel" for storage of multidataset models, data and the results of fitting.

Class "multitheta" that stores a list with one element of class "theta" for each dataset modeled.

Class "opt" stores options for fitting and plotting

Finds and removes outliers from a datasets

Generic function plotter in Package ‘TIMP’

Performs preprocessing on data stored as an objects of class dat.

This function reads in data the ivo file format

This function reads in a specification of constraints to zero on the clp.

Class "res" to store the results of model fitting associated with a single dataset.

Generic function residPart in Package ‘TIMP’

Class "spec" for the storage of spectral models.

Class "specopt" stores options for fitting and plotting spectral models

Makes a summary plot of spectra associated with kinetic components alongside a plot showing parameter estimates

Ultrafast time-resolved fluorescence data

Class "theta" for storage of nonlinear parameter estimates

Writes the average of scans stored in a file to a new file in the 'ivo' format