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read_QSM

Read a QSM

Description

Read a QSM file generated with treeQSM, simpletree, simpleforest or pypetree.

Usage

read_QSM(file, model)

Arguments

file

The directory to the QSM file path
model

treeQSM, simpletree, simpleforest or pypetree depending on the algorithm used to generate the QSM

Details

For treeQSM model, please respect the format with column order provided in the last version <https://github.com/InverseTampere/TreeQSM/blob/master/README.md>

Value

a list containing a data.table with the QSM and a character with the model name. This list can be used to build an aRchi object (see function build_aRchi)

See Also

aRchi the aRchi class;build_aRchi to build an object of class aRchi

Examples

file=system.file("extdata","Tree_1_TreeQSM.txt",package = "aRchi")
QSM=read_QSM(file,model="treeQSM")
aRchi

Quantitative Structural Model ('QSM') Treatment for Tree Architecture

v1.0.5
CeCILL
Authors
Olivier Martin
Initial release

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