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checkJumpDistance

Check if tags are jumping over arrays


Description

Check if tags are jumping over arrays

Usage

checkJumpDistance(
  movements,
  tag,
  bio,
  detections,
  spatial,
  arrays,
  dotmat,
  paths,
  jump.warning,
  jump.error,
  GUI,
  save.tables.locally,
  n
)

Arguments

movements

The movements table for a specific tag.

tag

The tag being analysed.

bio

A table with the tags and biometrics of the studied animals.

detections

The detections data.frame for a specific tag.

spatial

A list of spatial objects in the study area.

arrays

a list containing information for each array.

dotmat

The matrix of distances between arrays.

jump.warning

If a tag crosses a number of arrays equal or greater than jump.warning without being detected, a warning is issued. If left NULL (default), no warnings are issued.

jump.error

If a tag crosses a number of arrays equal or greater than jump.error without being detected, user intervention is suggested. If left NULL (default), user intervention is never suggested.

GUI

One of "needed", "always" or "never". If "needed", a new window is opened to inspect the movements only if the movements table is too big to be displayed in R's console. If "always", a graphical interface is always created when the possibility to invalidate events emerges. If "never", a graphical interface is never invoked. In this case, if the table to be displayed does not fit in R's console, a temporary file will be saved and the user will be prompted to open and examine that file. Defaults to "needed".

save.tables.locally

Logical: If a table must be temporarily stored into a file for user inspection, should it be saved in the current working directory, or in R's temporary folder?

n

A string indicating the overall progress.

Value

A list of movements with updated 'Valid' columns


actel

Acoustic Telemetry Data Analysis

v1.2.1
GPL-3
Authors
Hugo Flávio [aut, cre] (<https://orcid.org/0000-0002-5174-1197>)
Initial release

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