An interface for performing all stages of 'ADMIXTOOLS' analyses
(<https://reich.hms.harvard.edu/software>) entirely from R. Wrapper functions
(D, f4, f3, etc.) completely automate the generation of intermediate
configuration files, run 'ADMIXTOOLS' programs on the command-line, and
parse output files to extract values of interest. This allows users to focus
on the analysis itself instead of worrying about low-level technical details.
A set of complementary functions for processing and filtering of data in
the 'EIGENSTRAT' format is also provided.

An Interface for Running 'ADMIXTOOLS' Analyses

package-ubuntu-20.04-r-4.0.5#cran#admixr-0.9.1

<p>The data is downloaded to a temporary directory by default.
</p>

<table summary="R argblock"><tr valign="top">
<td><code>dirname</code></td>
<td>
<p>Directory in which to put the data (EIGENSTRAT trio
of snp/geno/ind files).</p>
</td>
</tr></table>

package-ubuntu-20.04-r-4.0.5#cran#admixr-0.9.1#docs#download_data

download_data

Description

Usage

Arguments

admixr

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