Soil Profile Group Labels
Labels groups of soil profiles within soil profile sketches.
See examples below for ideas.
profileGroupLabels( x0, x1, labels, y0 = 100, y1 = 98, label.offset = 2, label.cex = 0.75 )
x0 |
integer indices to the first profile within each group |
x1 |
integer indices to the last profile within each group |
labels |
vector of group labels |
y0 |
baseline depth used for group brackets |
y1 |
depth used for start and end markers for group brackets (see examples) |
label.offset |
vertical offset of group labels from baseline |
label.cex |
label size |
This function is typically called by some other convenience function
such as plotMultipleSPC.
D.E. Beaudette
# load sample data
data(sp3)
data(sp4)
# convert soil colors
sp3$h <- NA ; sp3$s <- NA ; sp3$v <- NA
sp3.rgb <- with(sp3, munsell2rgb(hue, value, chroma, return_triplets=TRUE))
sp3[, c('h','s','v')] <- t(with(sp3.rgb, rgb2hsv(r, g, b, maxColorValue=1)))
# promote to SoilProfileCollection
depths(sp3) <- id ~ top + bottom
depths(sp4) <- id ~ top + bottom
# combine into a list
spc.list <- list(sp3, sp4)
# compute group lengths and start/stop locations
n.groups <- length(spc.list)
spc.lengths <- sapply(spc.list, length)
n.pedons <- sum(spc.lengths)
group.starts <- c(1, 1 + cumsum(spc.lengths[-n.groups]))
group.ends <- cumsum(spc.lengths)
# determine depths of first / last profile in each group
yy <- unlist(sapply(spc.list, function(i) profileApply(i, max)))
tick.heights <- yy[c(group.starts, group.ends)] + 2
# plot 2 SoilProfileCollection objects on the same axis
par(mar=c(1,1,1,1))
plot(sp3, n=n.pedons)
plot(sp4, add=TRUE, x.idx.offset=group.ends[1], plot.depth.axis=FALSE, id.style='side')
# annotate groups
profileGroupLabels(x0=group.starts, x1=group.ends,
labels=c('Collection 1', 'Collection 2'), y0=120, y1=tick.heights)Please choose more modern alternatives, such as Google Chrome or Mozilla Firefox.