The AromaTransform class
Package: aroma.core
Class AromaTransform
Object~~|~~+--ParametersInterface~~~~~~~|~~~~~~~+--AromaTransform
Directly known subclasses:
public abstract static class AromaTransform
extends ParametersInterface
This abstract class represents a transform (algorithm/operator) that transforms data. A transform has an input data set, which is transformed into an output data set.
AromaTransform(dataSet=NULL, tags="*", ..., .reqSetClass="AromaMicroarrayDataSet")
dataSet |
The input data set as an |
tags |
A |
... |
Not used. |
.reqSetClass |
Internal argument. |
Subclasses must implement the process() method.
Methods:
getFullName |
Gets the full name of the output data set. | |
getInputDataSet |
Gets the input data set. | |
getName |
Gets the name of the output data set. | |
getOutputDataSet |
Gets the transformed data set. | |
getPath |
Gets the path of the output directory. | |
getRootPath |
Gets the root path of the output directory. | |
getTags |
Gets the tags of the output data set. | |
isDone |
Checks if the data set is processed or not. | |
process |
Processes the data set. | |
setTags |
- | |
Methods inherited from ParametersInterface:
getParameterSets, getParameters, getParametersAsString
Methods inherited from Object:
$, $<-, [[, [[<-, as.character, attach, attachLocally, clearCache, clearLookupCache, clone, detach, equals, extend, finalize, getEnvironment, getFieldModifier, getFieldModifiers, getFields, getInstantiationTime, getStaticInstance, hasField, hashCode, ll, load, names, objectSize, print, save, asThis
Henrik Bengtsson
Please choose more modern alternatives, such as Google Chrome or Mozilla Firefox.