biogrowth: TimeDistribution – R documentation

Become an expert in R — Interactive courses, Cheat Sheets, certificates and more!

TimeDistribution

TimeDistribution class

Description

The TimeDistribution class contains an estimate of the probability distribution of the time to reach a given microbial count. Its constructor is distribution_to_logcount.

It is a subclass of list with the items:

distribution Sample of the distribution of times to reach log_count.
summary Summary statistics of distribution (mean, sd, median, q10 and q90).

Usage

## S3 method for class 'TimeDistribution'
plot(x, y = NULL, ..., bin_width = NULL)

Arguments

`x`	The object of class `TimeDistribution` to plot.
`y`	ignored.
`...`	ignored.
`bin_width`	A number that specifies the width of a bin in the histogram, see: `geom_histogram`. `NULL` by default.

Functions

plot.TimeDistribution: plot of the distribution of the time to reach a microbial count.

biogrowth

Modelling of Population Growth

v0.2.0

GPL-3

Authors

Alberto Garre [aut, cre] (<https://orcid.org/0000-0002-4404-3550>), Jeroen Koomen [aut], Heidy den Besten [aut], Marcel Zwietering [aut]

Initial release