clinDR: plotD – R documentation

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plotD

Basic plot of dose group means

Description

Plot dose group means vs dose with options to connect points by lines, and include CI about each dose group mean based on within-group SDs

Usage

plotD(y, dose, baseline, se = TRUE, line = TRUE, 
    meansOnly=FALSE,sem=NULL,clev = 0.9, 
    xlab='Dose',ylab='Response', logScale=FALSE)

Arguments

`y`	Outcomes
`dose`	Doses corresponding to outcomes
`baseline`	If present, ANACOVA means are plotted, adjusted for baseline. Baseline is optional.
`se`	If T, plot CI for each dose group.
`line`	If T, dose group means are connected by a line
`meansOnly`	If T, y contains dose group means rather than individual observations. Baseline cannot be specified.
`sem`	If meansOnly and se=T, sem must contain the corresponding standard errors
`clev`	Level of CI for dose group means
`xlab`	Label for x-axis
`ylab`	Label for y-axis
`logScale`	If `TRUE`, log scale is used for dose.

Value

Returns a list with the ggplot object and two vectors with the dose group means and their standard errors.

Author(s)

Neal Thomas

Examples

data("metaData")
exdat<-metaData[metaData$taid==2 & metaData$etype==1,]
with(exdat,plotD(rslt,dose,meansOnly=TRUE,se=TRUE,sem=se,ylab=
"Y",xlab="Dose(mg)"))

clinDR

Simulation and Analysis Tools for Clinical Dose Response Modeling

v2.3.5

GPL (>= 2)

Authors

Neal Thomas [aut, cre] (<https://orcid.org/0000-0002-1915-8487>), Jing Wu [aut], Mike K. Smith [aut]

Initial release

2021-04-11